STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1BQ16_SOLTUMADS-box domain-containing protein. (142 aa)    
Predicted Functional Partners:
M1DMP0_SOLTU
MADS-box domain-containing protein.
  
     0.523
M1CP54_SOLTU
MADS-box domain-containing protein.
  
   
 0.518
M0ZG99_SOLTU
MADS-box domain-containing protein.
  
     0.505
M1DKN2_SOLTU
MADS-box domain-containing protein.
  
     0.494
M1DV79_SOLTU
MADS-box domain-containing protein.
  
     0.483
M1D9Z0_SOLTU
MADS-box domain-containing protein.
  
     0.482
M1DC32_SOLTU
MADS-box domain-containing protein.
  
     0.475
M1DC55_SOLTU
MADS-box domain-containing protein.
  
     0.466
M1DLK0_SOLTU
MADS-box domain-containing protein.
  
   
 0.447
M1DPP7_SOLTU
MADS-box domain-containing protein.
  
     0.435
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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