STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1BRV1_SOLTUUncharacterized protein; Belongs to the glycosyl hydrolase 17 family. (296 aa)    
Predicted Functional Partners:
M1BYV2_SOLTU
Uncharacterized protein; Belongs to the actin family.
    
 0.683
M1A9J6_SOLTU
SWIB domain-containing protein.
    
 0.572
M1B898_SOLTU
SWIB domain-containing protein.
    
 0.572
M1CNR0_SOLTU
Uncharacterized protein.
    
 0.550
M1CQU5_SOLTU
J domain-containing protein.
    
 0.550
M1CQU7_SOLTU
J domain-containing protein.
    
 0.550
M0ZJ74_SOLTU
Uncharacterized protein.
    
 0.546
M1AMA7_SOLTU
Uncharacterized protein.
    
 0.546
M1D5R6_SOLTU
SWIRM-assoc_1 domain-containing protein.
    
 0.546
M1A681_SOLTU
Uncharacterized protein.
    
 0.532
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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