M1BU67_SOLTU protein (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M1BU67_SOLTU

Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (470 aa)

Predicted Functional Partners:

M1CXM8_SOLTU

0.680

M1BKJ8_SOLTU

0.670

M1B8A0_SOLTU

0.580

M1CLX9_SOLTU

0.580

M1CYB0_SOLTU

0.580

M1AFD2_SOLTU

0.536

M1AZH7_SOLTU

0.536

M1C748_SOLTU

0.536

M1CLR5_SOLTU

0.536

M1CU05_SOLTU

0.533

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M1AFD2_SOLTU	M1BU67_SOLTU	M1AFD2	M1BU67	Phosphatidylinositol 4-phosphate 5-kinase.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.536
M1AFD2_SOLTU	M1CXM8_SOLTU	M1AFD2	M1CXM8	Phosphatidylinositol 4-phosphate 5-kinase.	Uncharacterized protein.	0.548
M1AZH7_SOLTU	M1BU67_SOLTU	M1AZH7	M1BU67	Phosphatidylinositol 4-phosphate 5-kinase.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.536
M1AZH7_SOLTU	M1CXM8_SOLTU	M1AZH7	M1CXM8	Phosphatidylinositol 4-phosphate 5-kinase.	Uncharacterized protein.	0.548
M1B8A0_SOLTU	M1BU67_SOLTU	M1B8A0	M1BU67	TYR_PHOSPHATASE_2 domain-containing protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.580
M1BKJ8_SOLTU	M1BU67_SOLTU	M1BKJ8	M1BU67	Phosphatidylinositol 4-phosphate 5-kinase.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.670
M1BKJ8_SOLTU	M1CXM8_SOLTU	M1BKJ8	M1CXM8	Phosphatidylinositol 4-phosphate 5-kinase.	Uncharacterized protein.	0.670
M1BU67_SOLTU	M1AFD2_SOLTU	M1BU67	M1AFD2	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Phosphatidylinositol 4-phosphate 5-kinase.	0.536
M1BU67_SOLTU	M1AZH7_SOLTU	M1BU67	M1AZH7	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Phosphatidylinositol 4-phosphate 5-kinase.	0.536
M1BU67_SOLTU	M1B8A0_SOLTU	M1BU67	M1B8A0	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	TYR_PHOSPHATASE_2 domain-containing protein.	0.580
M1BU67_SOLTU	M1BKJ8_SOLTU	M1BU67	M1BKJ8	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Phosphatidylinositol 4-phosphate 5-kinase.	0.670
M1BU67_SOLTU	M1C748_SOLTU	M1BU67	M1C748	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Phosphatidylinositol 4-phosphate 5-kinase.	0.536
M1BU67_SOLTU	M1CLR5_SOLTU	M1BU67	M1CLR5	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Phosphatidylinositol 4-phosphate 5-kinase.	0.536
M1BU67_SOLTU	M1CLX9_SOLTU	M1BU67	M1CLX9	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.580
M1BU67_SOLTU	M1CU05_SOLTU	M1BU67	M1CU05	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Phosphatidylinositol 4-phosphate 5-kinase.	0.533
M1BU67_SOLTU	M1CXM8_SOLTU	M1BU67	M1CXM8	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.680
M1BU67_SOLTU	M1CYB0_SOLTU	M1BU67	M1CYB0	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Tyrosine-protein phosphatase domain-containing protein.	0.580
M1C748_SOLTU	M1BU67_SOLTU	M1C748	M1BU67	Phosphatidylinositol 4-phosphate 5-kinase.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.536
M1C748_SOLTU	M1CXM8_SOLTU	M1C748	M1CXM8	Phosphatidylinositol 4-phosphate 5-kinase.	Uncharacterized protein.	0.548
M1CLR5_SOLTU	M1BU67_SOLTU	M1CLR5	M1BU67	Phosphatidylinositol 4-phosphate 5-kinase.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.536