STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1BZ56_SOLTUUsp domain-containing protein. (163 aa)    
Predicted Functional Partners:
PHP
Uncharacterized protein.
    
 0.652
M1BQ52_SOLTU
Uncharacterized protein.
    
 0.595
M1AQG4_SOLTU
PH domain-containing protein.
      
 0.542
M0ZWK6_SOLTU
CPSF_A domain-containing protein.
    
 0.507
M1A4P6_SOLTU
GTP_EFTU_D3 domain-containing protein.
    
 0.504
M1BVD5_SOLTU
Uncharacterized protein.
    
 0.494
M1BVD6_SOLTU
Uncharacterized protein.
    
 0.494
M1BVD7_SOLTU
DSHCT domain-containing protein.
    
 0.494
M1C2F9_SOLTU
Uncharacterized protein.
    
 0.494
M1AWX7_SOLTU
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
     
 0.492
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.