STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1C0G2_SOLTUUncharacterized protein. (112 aa)    
Predicted Functional Partners:
M1AWE0_SOLTU
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.852
rps11
30S ribosomal protein S11, chloroplastic; Belongs to the universal ribosomal protein uS11 family.
   
   0.851
M1BP07_SOLTU
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.850
rps18
30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family.
    
   0.849
CRP
Ribosom_S30AE_C domain-containing protein.
    
 
 0.819
M1AZL5_SOLTU
Uncharacterized protein.
   
   0.818
M1BQ73_SOLTU
Uncharacterized protein.
   
   0.818
M1AX56_SOLTU
Uncharacterized protein.
   
 
 0.814
M0ZND0_SOLTU
Uncharacterized protein.
   
   0.810
M0ZWB6_SOLTU
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
   
   0.810
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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