M1C240_SOLTU protein (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M1C240_SOLTU

Uncharacterized protein. (94 aa)

Predicted Functional Partners:

M1BH31_SOLTU

0.866

M1ACI2_SOLTU

0.864

M1A9M4_SOLTU

0.789

M1BI62_SOLTU

0.789

M1C9G5_SOLTU

0.789

M0ZVC0_SOLTU

0.757

M1BE54_SOLTU

0.757

M1BEB3_SOLTU

0.757

M1DTR7_SOLTU

0.757

M0ZN33_SOLTU

0.724

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZN33_SOLTU	M0ZVC0_SOLTU	M0ZN33	M0ZVC0	Uncharacterized protein.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.576
M0ZN33_SOLTU	M1A9M4_SOLTU	M0ZN33	M1A9M4	Uncharacterized protein.	Uncharacterized protein.	0.648
M0ZN33_SOLTU	M1ACI2_SOLTU	M0ZN33	M1ACI2	Uncharacterized protein.	Uncharacterized protein.	0.791
M0ZN33_SOLTU	M1BE54_SOLTU	M0ZN33	M1BE54	Uncharacterized protein.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.576
M0ZN33_SOLTU	M1BEB3_SOLTU	M0ZN33	M1BEB3	Uncharacterized protein.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.576
M0ZN33_SOLTU	M1BH31_SOLTU	M0ZN33	M1BH31	Uncharacterized protein.	Uncharacterized protein.	0.808
M0ZN33_SOLTU	M1BI62_SOLTU	M0ZN33	M1BI62	Uncharacterized protein.	Uncharacterized protein.	0.648
M0ZN33_SOLTU	M1C240_SOLTU	M0ZN33	M1C240	Uncharacterized protein.	Uncharacterized protein.	0.724
M0ZN33_SOLTU	M1C9G5_SOLTU	M0ZN33	M1C9G5	Uncharacterized protein.	Uncharacterized protein.	0.648
M0ZN33_SOLTU	M1DTR7_SOLTU	M0ZN33	M1DTR7	Uncharacterized protein.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.576
M0ZVC0_SOLTU	M0ZN33_SOLTU	M0ZVC0	M0ZN33	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	Uncharacterized protein.	0.576
M0ZVC0_SOLTU	M1A9M4_SOLTU	M0ZVC0	M1A9M4	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	Uncharacterized protein.	0.658
M0ZVC0_SOLTU	M1ACI2_SOLTU	M0ZVC0	M1ACI2	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	Uncharacterized protein.	0.794
M0ZVC0_SOLTU	M1BE54_SOLTU	M0ZVC0	M1BE54	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.551
M0ZVC0_SOLTU	M1BEB3_SOLTU	M0ZVC0	M1BEB3	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.546
M0ZVC0_SOLTU	M1BH31_SOLTU	M0ZVC0	M1BH31	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	Uncharacterized protein.	0.795
M0ZVC0_SOLTU	M1BI62_SOLTU	M0ZVC0	M1BI62	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	Uncharacterized protein.	0.658
M0ZVC0_SOLTU	M1C240_SOLTU	M0ZVC0	M1C240	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	Uncharacterized protein.	0.757
M0ZVC0_SOLTU	M1C9G5_SOLTU	M0ZVC0	M1C9G5	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	Uncharacterized protein.	0.658
M0ZVC0_SOLTU	M1DTR7_SOLTU	M0ZVC0	M1DTR7	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.545