STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1C3X2_SOLTUUncharacterized protein. (729 aa)    
Predicted Functional Partners:
M0ZWB6_SOLTU
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
   
   0.798
M1C5C5_SOLTU
Uncharacterized protein.
  
   0.798
M1BWL5_SOLTU
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.795
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.795
M1CNG1_SOLTU
S1 motif domain-containing protein.
   
 0.793
M1CGN3_SOLTU
Uncharacterized protein.
  
   0.775
M1CWR8_SOLTU
Uncharacterized protein.
  
   0.775
Q2V9B2_SOLTU
Eukaryotic translation initiation factor 2 beta subunit-like.
   
 
 0.763
M1ATG8_SOLTU
Uncharacterized protein.
   
 
 0.758
M1AYK6_SOLTU
Uncharacterized protein.
   
 
 0.758
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.