STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1C4F7_SOLTUCRC domain-containing protein. (891 aa)    
Predicted Functional Partners:
M1AU00_SOLTU
Uncharacterized protein.
   
 0.840
M0ZR98_SOLTU
WD_REPEATS_REGION domain-containing protein.
   
 0.767
M1A6L2_SOLTU
WD_REPEATS_REGION domain-containing protein.
   
 0.767
M1C6W9_SOLTU
WD_REPEATS_REGION domain-containing protein.
   
 0.767
M1B907_SOLTU
Uncharacterized protein.
   
 0.688
M1AFD6_SOLTU
Uncharacterized protein; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.
   
 0.671
M1AHN1_SOLTU
Uncharacterized protein.
   
 0.671
M0ZWS1_SOLTU
E2F_TDP domain-containing protein.
   
 0.580
M1A3L4_SOLTU
Uncharacterized protein.
   
 0.580
M1A5L5_SOLTU
Uncharacterized protein.
   
 0.580
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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