Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
M0ZZH4_SOLTU | M1A511_SOLTU | M0ZZH4 | M1A511 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.778 |
M0ZZH4_SOLTU | M1A5E3_SOLTU | M0ZZH4 | M1A5E3 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.846 |
M0ZZH4_SOLTU | M1BSH2_SOLTU | M0ZZH4 | M1BSH2 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.930 |
M0ZZH4_SOLTU | M1BU17_SOLTU | M0ZZH4 | M1BU17 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.980 |
M0ZZH4_SOLTU | M1BWE4_SOLTU | M0ZZH4 | M1BWE4 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.977 |
M0ZZH4_SOLTU | M1BZP9_SOLTU | M0ZZH4 | M1BZP9 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.930 |
M0ZZH4_SOLTU | M1C5P3_SOLTU | M0ZZH4 | M1C5P3 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.799 |
M0ZZH4_SOLTU | psaD | M0ZZH4 | Q70PN9 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Putative photosystem I reaction centre PSI-D subunit. | 0.957 |
M0ZZH4_SOLTU | psaI | M0ZZH4 | Q2VEG7 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family. | 0.959 |
M0ZZH4_SOLTU | psaJ | M0ZZH4 | Q2VEF8 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. | 0.964 |
M1A511_SOLTU | M0ZZH4_SOLTU | M1A511 | M0ZZH4 | Uncharacterized protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.778 |
M1A511_SOLTU | M1A5E3_SOLTU | M1A511 | M1A5E3 | Uncharacterized protein. | Uncharacterized protein. | 0.943 |
M1A511_SOLTU | M1BSH2_SOLTU | M1A511 | M1BSH2 | Uncharacterized protein. | Uncharacterized protein. | 0.952 |
M1A511_SOLTU | M1BU17_SOLTU | M1A511 | M1BU17 | Uncharacterized protein. | Uncharacterized protein. | 0.983 |
M1A511_SOLTU | M1BWE4_SOLTU | M1A511 | M1BWE4 | Uncharacterized protein. | Uncharacterized protein. | 0.972 |
M1A511_SOLTU | M1BZP9_SOLTU | M1A511 | M1BZP9 | Uncharacterized protein. | Uncharacterized protein. | 0.952 |
M1A511_SOLTU | M1C5P3_SOLTU | M1A511 | M1C5P3 | Uncharacterized protein. | Uncharacterized protein. | 0.751 |
M1A511_SOLTU | psaD | M1A511 | Q70PN9 | Uncharacterized protein. | Putative photosystem I reaction centre PSI-D subunit. | 0.961 |
M1A511_SOLTU | psaI | M1A511 | Q2VEG7 | Uncharacterized protein. | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family. | 0.933 |
M1A511_SOLTU | psaJ | M1A511 | Q2VEF8 | Uncharacterized protein. | Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. | 0.960 |
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