STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1C8F8_SOLTUAconitase_C domain-containing protein. (256 aa)    
Predicted Functional Partners:
M1D0D3_SOLTU
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 0.994
M1B638_SOLTU
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.980
M1BCJ8_SOLTU
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.980
M1C4N9_SOLTU
Pyruvate carboxyltransferase domain-containing protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.980
M1B1N3_SOLTU
Aconitase domain-containing protein.
  
 0.969
M1BC49_SOLTU
Uncharacterized protein.
  
  
 0.855
M0ZMF9_SOLTU
Iso_dh domain-containing protein.
  
 0.834
M1BEG6_SOLTU
Iso_dh domain-containing protein.
  
 0.834
M1BNJ2_SOLTU
Uncharacterized protein.
  
 
 0.834
M1CHE3_SOLTU
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.834
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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