STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CC10_SOLTUProtein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (201 aa)    
Predicted Functional Partners:
M1B4H5_SOLTU
Uncharacterized protein.
    
 
 0.616
M1AIX9_SOLTU
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.446
M0ZYV4_SOLTU
GOLD domain-containing protein.
   
 
 0.418
M1B1K9_SOLTU
GOLD domain-containing protein.
   
 
 0.418
M1C099_SOLTU
GOLD domain-containing protein.
   
 
 0.418
M1CX30_SOLTU
GOLD domain-containing protein.
   
 
 0.418
M1CYK8_SOLTU
GOLD domain-containing protein.
   
 
 0.418
M1BWD2_SOLTU
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
 
 0.410
M1D3S3_SOLTU
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
 
 0.410
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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