STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CCG0_SOLTUUncharacterized protein. (320 aa)    
Predicted Functional Partners:
M1AX01_SOLTU
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
    
 
 0.701
M1AD46_SOLTU
NAD(P)-bd_dom domain-containing protein.
      
 0.682
M1ASD0_SOLTU
NAD(P)-bd_dom domain-containing protein.
      
 0.682
M1A0B6_SOLTU
NAD(P)-bd_dom domain-containing protein.
      
 0.679
M1BUC2_SOLTU
NAD(P)-bd_dom domain-containing protein.
      
 0.679
M0ZXH7_SOLTU
NAD(P)-bd_dom domain-containing protein.
      
 0.671
M1A9Z2_SOLTU
Epimerase domain-containing protein.
      
 0.671
M1AKN0_SOLTU
Epimerase domain-containing protein.
      
 0.671
M1BAA7_SOLTU
NAD(P)-bd_dom domain-containing protein.
      
 0.671
M1C3Z2_SOLTU
NAD(P)-bd_dom domain-containing protein.
      
 0.671
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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