STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CD08_SOLTURING-type domain-containing protein. (221 aa)    
Predicted Functional Partners:
M1BD24_SOLTU
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.539
M1D0U8_SOLTU
PRKCSH domain-containing protein.
     
 0.515
M1BIC0_SOLTU
Uncharacterized protein.
   
 0.486
M1CR81_SOLTU
PHB domain-containing protein.
   
 0.486
M1BCN3_SOLTU
F-box domain-containing protein.
     
 0.453
M1BLM2_SOLTU
F-box domain-containing protein.
     
 0.453
M1BUP8_SOLTU
Uncharacterized protein.
     
 0.453
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (24%) [HD]