STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CFX7_SOLTUCarboxypeptidase; Belongs to the peptidase S10 family. (648 aa)    
Predicted Functional Partners:
M0ZHM7_SOLTU
Uncharacterized protein.
   
  
 0.715
M1DEF8_SOLTU
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.698
M1DFQ4_SOLTU
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.698
M0ZSN2_SOLTU
Uncharacterized protein.
      
 0.672
M0ZLQ0_SOLTU
Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
      
 0.671
M1C5E6_SOLTU
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
      
 0.671
M1CWA9_SOLTU
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
      
 0.671
M1CZP0_SOLTU
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
      
 0.671
Q307Y8_SOLTU
Ribosomal protein L11-like protein; Belongs to the universal ribosomal protein uL5 family.
      
 0.671
M1B8D3_SOLTU
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
      
 0.670
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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