STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAME9AP2/ERF domain-containing protein. (222 aa)    
Predicted Functional Partners:
sgt3.1
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.672
M1ADD1_SOLTU
RING-type domain-containing protein.
      
 0.672
M1ADK9_SOLTU
RING-type domain-containing protein.
      
 0.672
M1ADL0_SOLTU
RING-type domain-containing protein.
      
 0.672
M1BYM1_SOLTU
RING-type domain-containing protein.
      
 0.672
M1BYM3_SOLTU
RING-type domain-containing protein.
      
 0.672
M1CWQ6_SOLTU
RING-type domain-containing protein.
      
 0.672
M0ZQ08_SOLTU
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
      
 0.671
M1BUW3_SOLTU
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
      
 0.670
HMG1
3-hydroxy-3-methylglutaryl-coenzyme A reductase 1; Catalyzes the synthesis of mevalonate. The specific precursor of all isoprenoid compounds present in plants; Belongs to the HMG-CoA reductase family.
      
 0.549
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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