M1CIS3_SOLTU protein (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M1CIS3_SOLTU

LMWPc domain-containing protein. (172 aa)

Predicted Functional Partners:

M1BAK5_SOLTU

0.837

M1CXN0_SOLTU

0.837

M1C3P9_SOLTU

0.836

M1CZE9_SOLTU

0.810

M1A263_SOLTU

0.786

Apsr1

0.786

M1BRD7_SOLTU

0.786

M1DE37_SOLTU

0.758

M0ZFY4_SOLTU

0.744

M0ZJQ4_SOLTU

0.744

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Apsr1	M1A263_SOLTU	M1BD45	M1A263	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.958
Apsr1	M1BRD7_SOLTU	M1BD45	M1BRD7	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.958
Apsr1	M1CIS3_SOLTU	M1BD45	M1CIS3	Thioredoxin domain-containing protein.	LMWPc domain-containing protein.	0.786
M0ZFY4_SOLTU	M1BAK5_SOLTU	M0ZFY4	M1BAK5	ATPase 102598324; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inserti [...]	CitMHS domain-containing protein.	0.574
M0ZFY4_SOLTU	M1C3P9_SOLTU	M0ZFY4	M1C3P9	ATPase 102598324; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inserti [...]	CitMHS domain-containing protein.	0.574
M0ZFY4_SOLTU	M1CIS3_SOLTU	M0ZFY4	M1CIS3	ATPase 102598324; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inserti [...]	LMWPc domain-containing protein.	0.744
M0ZFY4_SOLTU	M1CXN0_SOLTU	M0ZFY4	M1CXN0	ATPase 102598324; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inserti [...]	CitMHS domain-containing protein.	0.574
M0ZJQ4_SOLTU	M1BAK5_SOLTU	M0ZJQ4	M1BAK5	Uncharacterized protein.	CitMHS domain-containing protein.	0.574
M0ZJQ4_SOLTU	M1C3P9_SOLTU	M0ZJQ4	M1C3P9	Uncharacterized protein.	CitMHS domain-containing protein.	0.574
M0ZJQ4_SOLTU	M1CIS3_SOLTU	M0ZJQ4	M1CIS3	Uncharacterized protein.	LMWPc domain-containing protein.	0.744
M0ZJQ4_SOLTU	M1CXN0_SOLTU	M0ZJQ4	M1CXN0	Uncharacterized protein.	CitMHS domain-containing protein.	0.574
M1A263_SOLTU	Apsr1	M1A263	M1BD45	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.958
M1A263_SOLTU	M1BRD7_SOLTU	M1A263	M1BRD7	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.958
M1A263_SOLTU	M1CIS3_SOLTU	M1A263	M1CIS3	Thioredoxin domain-containing protein.	LMWPc domain-containing protein.	0.786
M1BAK5_SOLTU	M0ZFY4_SOLTU	M1BAK5	M0ZFY4	CitMHS domain-containing protein.	ATPase 102598324; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inserti [...]	0.574
M1BAK5_SOLTU	M0ZJQ4_SOLTU	M1BAK5	M0ZJQ4	CitMHS domain-containing protein.	Uncharacterized protein.	0.574
M1BAK5_SOLTU	M1CIS3_SOLTU	M1BAK5	M1CIS3	CitMHS domain-containing protein.	LMWPc domain-containing protein.	0.837
M1BRD7_SOLTU	Apsr1	M1BRD7	M1BD45	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.958
M1BRD7_SOLTU	M1A263_SOLTU	M1BRD7	M1A263	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.958
M1BRD7_SOLTU	M1CIS3_SOLTU	M1BRD7	M1CIS3	Thioredoxin domain-containing protein.	LMWPc domain-containing protein.	0.786