Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
M1A3H5_SOLTU | POTPHYB2 | M1A3H5 | M1CLI4 | UBP-type domain-containing protein. | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | 0.530 |
M1AG20_SOLTU | M1BFT9_SOLTU | M1AG20 | M1BFT9 | Photolyase/cryptochrome alpha/beta domain-containing protein. | Photolyase/cryptochrome alpha/beta domain-containing protein. | 0.921 |
M1AG20_SOLTU | M1D3Y3_SOLTU | M1AG20 | M1D3Y3 | Photolyase/cryptochrome alpha/beta domain-containing protein. | Uncharacterized protein. | 0.561 |
M1AG20_SOLTU | POTPHYB2 | M1AG20 | M1CLI4 | Photolyase/cryptochrome alpha/beta domain-containing protein. | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | 0.436 |
M1B6D6_SOLTU | POTPHYB2 | M1B6D6 | M1CLI4 | BHLH domain-containing protein. | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | 0.454 |
M1BFT9_SOLTU | M1AG20_SOLTU | M1BFT9 | M1AG20 | Photolyase/cryptochrome alpha/beta domain-containing protein. | Photolyase/cryptochrome alpha/beta domain-containing protein. | 0.921 |
M1BFT9_SOLTU | M1BK41_SOLTU | M1BFT9 | M1BK41 | Photolyase/cryptochrome alpha/beta domain-containing protein. | BHLH domain-containing protein. | 0.572 |
M1BFT9_SOLTU | M1D3Y3_SOLTU | M1BFT9 | M1D3Y3 | Photolyase/cryptochrome alpha/beta domain-containing protein. | Uncharacterized protein. | 0.618 |
M1BFT9_SOLTU | POTPHYB2 | M1BFT9 | M1CLI4 | Photolyase/cryptochrome alpha/beta domain-containing protein. | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | 0.412 |
M1BJP2_SOLTU | POTPHYB2 | M1BJP2 | M1CLI4 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | 0.421 |
M1BK41_SOLTU | M1BFT9_SOLTU | M1BK41 | M1BFT9 | BHLH domain-containing protein. | Photolyase/cryptochrome alpha/beta domain-containing protein. | 0.572 |
M1BK41_SOLTU | POTPHYB2 | M1BK41 | M1CLI4 | BHLH domain-containing protein. | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | 0.658 |
M1BMV1_SOLTU | POTPHYB2 | M1BMV1 | M1CLI4 | BHLH domain-containing protein. | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | 0.454 |
M1CKF1_SOLTU | POTPHYB2 | M1CKF1 | M1CLI4 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | 0.421 |
M1D3Y3_SOLTU | M1AG20_SOLTU | M1D3Y3 | M1AG20 | Uncharacterized protein. | Photolyase/cryptochrome alpha/beta domain-containing protein. | 0.561 |
M1D3Y3_SOLTU | M1BFT9_SOLTU | M1D3Y3 | M1BFT9 | Uncharacterized protein. | Photolyase/cryptochrome alpha/beta domain-containing protein. | 0.618 |
M1D3Y3_SOLTU | POTPHYB2 | M1D3Y3 | M1CLI4 | Uncharacterized protein. | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | 0.403 |
M1DRE9_SOLTU | POTPHYB2 | M1DRE9 | M1CLI4 | Protein kinase domain-containing protein. | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | 0.443 |
POTPHYB2 | M1A3H5_SOLTU | M1CLI4 | M1A3H5 | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | UBP-type domain-containing protein. | 0.530 |
POTPHYB2 | M1AG20_SOLTU | M1CLI4 | M1AG20 | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | Photolyase/cryptochrome alpha/beta domain-containing protein. | 0.436 |
page 1 of 2