STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CLJ6_SOLTUUncharacterized protein. (90 aa)    
Predicted Functional Partners:
M1BWE4_SOLTU
Uncharacterized protein.
   
 
 0.864
M1BU17_SOLTU
Uncharacterized protein.
   
 
 0.862
psaD
Putative photosystem I reaction centre PSI-D subunit.
   
 
 0.859
psaI
Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family.
    
 
 0.836
M1A5E3_SOLTU
Uncharacterized protein.
   
 
 0.810
psaJ
Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family.
    
 
 0.809
M0ZZH4_SOLTU
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
 
 0.799
M1A511_SOLTU
Uncharacterized protein.
   
 
 0.751
M1BSH2_SOLTU
Uncharacterized protein.
   
 
 0.743
M1BZP9_SOLTU
Uncharacterized protein.
   
 
 0.743
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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