STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CM91_SOLTULipase_GDSL domain-containing protein. (354 aa)    
Predicted Functional Partners:
M1A184_SOLTU
RING-type domain-containing protein.
    
 0.932
M1AH18_SOLTU
Ribosomal_L2 domain-containing protein.
    
 0.750
rpl2-A
50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.
    
 0.750
M1CZA2_SOLTU
Cell division control protein; Belongs to the CDC6/cdc18 family.
    
 0.702
M1AHZ4_SOLTU
E2_bind domain-containing protein.
   
 0.621
M1BP14_SOLTU
Ribosomal_L2_C domain-containing protein.
    
 0.608
M1BZ12_SOLTU
Ribosomal_L2_C domain-containing protein.
    
 0.608
M1CCA0_SOLTU
Ribosomal_L2_C domain-containing protein.
    
 0.608
M1AVA9_SOLTU
Uncharacterized protein.
   
 0.605
M1AVB0_SOLTU
HECT domain-containing protein.
   
 0.605
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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