STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CQK6_SOLTUUncharacterized protein. (356 aa)    
Predicted Functional Partners:
M1C340_SOLTU
Semialdhyde_dh domain-containing protein.
     
 0.949
M1D6Q4_SOLTU
Uncharacterized protein.
   
 
 0.929
M1BR01_SOLTU
Uncharacterized protein.
  
  
 
0.900
M1CSB5_SOLTU
Uncharacterized protein.
     
 0.620
M0ZJD3_SOLTU
Uncharacterized protein.
  
  
 0.470
M1CFV7_SOLTU
PKS_ER domain-containing protein.
  
 0.456
M1CSC4_SOLTU
Glutathione synthetase.
   
 0.456
M1CDF4_SOLTU
Uncharacterized protein.
      
 0.446
M0ZTX3_SOLTU
Aldo_ket_red domain-containing protein.
  
 0.422
M1BP81_SOLTU
Hcy-binding domain-containing protein.
   
 0.421
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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