STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CR69_SOLTUUncharacterized protein; Belongs to the AAA ATPase family. (611 aa)    
Predicted Functional Partners:
M1C800_SOLTU
MPN domain-containing protein.
   
 0.916
M1BD24_SOLTU
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.912
M1C160_SOLTU
OTU domain-containing protein.
   
 0.903
M1D0U8_SOLTU
PRKCSH domain-containing protein.
    
 0.875
M1CKM8_SOLTU
RING-type domain-containing protein.
    
 0.874
M1BNE8_SOLTU
Josephin domain-containing protein.
    
 0.865
M1BPR7_SOLTU
Uncharacterized protein.
    
 0.818
M0ZJ33_SOLTU
Uncharacterized protein.
   
 0.815
M1BE38_SOLTU
Uncharacterized protein.
   
 0.815
M1D5K4_SOLTU
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
   
 0.814
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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