STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CSE0_SOLTUSignal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family. (167 aa)    
Predicted Functional Partners:
CYN
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.993
M1BMW4_SOLTU
Signal peptidase I.
   
 0.989
M1BMW5_SOLTU
Signal peptidase I.
   
 0.989
M0ZHR2_SOLTU
Peptidase_S26 domain-containing protein.
   
 0.887
M1AAA4_SOLTU
Peptidase_S24 domain-containing protein.
   
 0.887
M1AF47_SOLTU
Peptidase_S24 domain-containing protein.
   
 0.887
M1AFT8_SOLTU
Peptidase_S24 domain-containing protein.
   
 0.887
M1ANL9_SOLTU
Uncharacterized protein.
   
 0.887
M1AUC0_SOLTU
Peptidase_S26 domain-containing protein.
   
 0.887
M1CCJ2_SOLTU
Uncharacterized protein.
     
 0.665
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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