STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CSQ1_SOLTUPMEI domain-containing protein. (187 aa)    
Predicted Functional Partners:
M1BPE5_SOLTU
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.979
M1CKH6_SOLTU
Uncharacterized protein.
  
 0.979
Q38HT5_SOLTU
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.979
M0ZQX8_SOLTU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.961
M1C5C5_SOLTU
Uncharacterized protein.
  
 0.955
M1BT69_SOLTU
Ribosomal_L18_c domain-containing protein.
  
 
 0.953
M0ZM85_SOLTU
S4 RNA-binding domain-containing protein.
  
 0.947
M1CL91_SOLTU
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 
 0.947
M1AGH1_SOLTU
Uncharacterized protein.
   
 0.944
M0ZY89_SOLTU
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.942
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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