STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CTC5_SOLTUUncharacterized protein. (444 aa)    
Predicted Functional Partners:
M1AHN9_SOLTU
Uncharacterized protein.
   
 
  0.481
M1BSI6_SOLTU
Uncharacterized protein.
   
  0.471
M1CLI8_SOLTU
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.459
M1CSW4_SOLTU
MPN domain-containing protein.
   
   0.447
M1CX25_SOLTU
RPOLD domain-containing protein.
   
 
  0.433
M0ZNI9_SOLTU
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 
  0.413
M1A270_SOLTU
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 
  0.413
M1B0P2_SOLTU
Uncharacterized protein.
    
   0.410
M1A5G9_SOLTU
RPOL4c domain-containing protein.
    
  0.403
M1DYN3_SOLTU
RPOL4c domain-containing protein.
    
  0.403
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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