STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CW43_SOLTUG-patch domain-containing protein. (484 aa)    
Predicted Functional Partners:
M0ZQC3_SOLTU
Uncharacterized protein.
    
 0.961
M1AH58_SOLTU
Uncharacterized protein.
    
 0.961
M1CAJ7_SOLTU
PWI domain-containing protein.
    
 0.961
M1CAK1_SOLTU
Uncharacterized protein.
    
 0.961
M1B2E5_SOLTU
Uncharacterized protein.
   
  0.956
M1BXM6_SOLTU
Uncharacterized protein.
    
 0.950
M1AAT4_SOLTU
Uncharacterized protein.
   
 0.948
M1B8W9_SOLTU
Uncharacterized protein.
   
 0.948
M1C269_SOLTU
Uncharacterized protein.
   
 
 0.939
M1CSW4_SOLTU
MPN domain-containing protein.
    
 
 0.904
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.