STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CWK7_SOLTUUncharacterized protein. (212 aa)    
Predicted Functional Partners:
M1A8A9_SOLTU
Homeobox domain-containing protein.
      
 0.541
M1ALQ7_SOLTU
Uncharacterized protein.
      
 0.541
M1CDM2_SOLTU
Homeobox domain-containing protein.
      
 0.541
M1CD96_SOLTU
TPR_REGION domain-containing protein.
      
 0.469
M0ZGU5_SOLTU
Uncharacterized protein.
      
 0.459
M1A903_SOLTU
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
      
 0.451
M1AUY4_SOLTU
DNA helicase; Belongs to the MCM family.
      
 0.414
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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