STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1D1K1_SOLTUReplication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (905 aa)    
Predicted Functional Partners:
M1B2V0_SOLTU
Uncharacterized protein.
   
 0.969
M1CQ28_SOLTU
Uncharacterized protein.
   
 0.969
M1AHF0_SOLTU
Uncharacterized protein.
     
 0.916
M1DQV8_SOLTU
Uncharacterized protein.
     
 0.902
M1D4E2_SOLTU
Uncharacterized protein.
    
  0.900
M1B3N8_SOLTU
3'-5' exonuclease domain-containing protein.
    
 0.787
M1CDW0_SOLTU
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.787
M1AWQ1_SOLTU
Uncharacterized protein.
   
 0.748
M1B7B6_SOLTU
Uncharacterized protein.
   
 0.686
M1BGW7_SOLTU
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
   
 0.673
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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