STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1D4I4_SOLTUTranscription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (89 aa)    
Predicted Functional Partners:
M1CDD7_SOLTU
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
   
 0.941
PHP
Uncharacterized protein.
    
  0.921
M1CQD2_SOLTU
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
    
 0.901
M1BEB1_SOLTU
TFIIS N-terminal domain-containing protein.
    
 
 0.882
M1C1N5_SOLTU
Plus3 domain-containing protein.
    
  0.876
M1CX25_SOLTU
RPOLD domain-containing protein.
   
 
 0.867
M1AEA3_SOLTU
RNA_pol_L_2 domain-containing protein.
   
   0.864
M1AHN9_SOLTU
Uncharacterized protein.
   
   0.850
M1BSI6_SOLTU
Uncharacterized protein.
   
   0.845
M1CBH1_SOLTU
Uncharacterized protein.
    
 0.839
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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