STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1D5J4_SOLTUNon-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (63 aa)    
Predicted Functional Partners:
M1D5F9_SOLTU
zf-RING-like domain-containing protein.
   
 0.980
M1AXC6_SOLTU
SP-RING-type domain-containing protein.
    
 0.979
M1B4R8_SOLTU
Uncharacterized protein.
   
 0.960
M1CYD8_SOLTU
Uncharacterized protein.
   
 0.944
M1A5I3_SOLTU
SMC_N domain-containing protein.
   
 0.843
M0ZGJ7_SOLTU
LEA_2 domain-containing protein.
   
 0.760
M0ZMP5_SOLTU
DUF641 domain-containing protein.
   
 0.760
M1AW06_SOLTU
LEA_2 domain-containing protein.
   
 0.760
M1B9Y9_SOLTU
X8 domain-containing protein; Belongs to the glycosyl hydrolase 17 family.
   
 0.760
M1BSG1_SOLTU
SMC_N domain-containing protein.
   
 0.760
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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