Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
K7WNV9_SOLTU | M1DB25_SOLTU | K7WNV9 | M1DB25 | Thioredoxin; Belongs to the thioredoxin family. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.719 |
M0ZI36_SOLTU | M1BUJ0_SOLTU | M0ZI36 | M1BUJ0 | Rieske domain-containing protein. | Uncharacterized protein. | 0.488 |
M0ZI36_SOLTU | M1DB25_SOLTU | M0ZI36 | M1DB25 | Rieske domain-containing protein. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.700 |
M0ZVR1_SOLTU | M1DB25_SOLTU | M0ZVR1 | M1DB25 | Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.674 |
M0ZVR1_SOLTU | psaD | M0ZVR1 | Q70PN9 | Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. | Putative photosystem I reaction centre PSI-D subunit. | 0.492 |
M0ZWN2_SOLTU | M1DB25_SOLTU | M0ZWN2 | M1DB25 | Thioredoxin; Belongs to the thioredoxin family. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.698 |
M1BHP2_SOLTU | M1DB25_SOLTU | M1BHP2 | M1DB25 | Thioredoxin; Belongs to the thioredoxin family. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.687 |
M1BK29_SOLTU | M1BUJ0_SOLTU | M1BK29 | M1BUJ0 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Uncharacterized protein. | 0.935 |
M1BK29_SOLTU | M1DB25_SOLTU | M1BK29 | M1DB25 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.819 |
M1BUJ0_SOLTU | M0ZI36_SOLTU | M1BUJ0 | M0ZI36 | Uncharacterized protein. | Rieske domain-containing protein. | 0.488 |
M1BUJ0_SOLTU | M1BK29_SOLTU | M1BUJ0 | M1BK29 | Uncharacterized protein. | NADPH:adrenodoxin oxidoreductase, mitochondrial. | 0.935 |
M1BUJ0_SOLTU | M1BWE4_SOLTU | M1BUJ0 | M1BWE4 | Uncharacterized protein. | Uncharacterized protein. | 0.690 |
M1BUJ0_SOLTU | M1DB25_SOLTU | M1BUJ0 | M1DB25 | Uncharacterized protein. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.670 |
M1BUJ0_SOLTU | psaD | M1BUJ0 | Q70PN9 | Uncharacterized protein. | Putative photosystem I reaction centre PSI-D subunit. | 0.660 |
M1BWE4_SOLTU | M1BUJ0_SOLTU | M1BWE4 | M1BUJ0 | Uncharacterized protein. | Uncharacterized protein. | 0.690 |
M1BWE4_SOLTU | M1DB25_SOLTU | M1BWE4 | M1DB25 | Uncharacterized protein. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.804 |
M1BWE4_SOLTU | psaD | M1BWE4 | Q70PN9 | Uncharacterized protein. | Putative photosystem I reaction centre PSI-D subunit. | 0.998 |
M1BYR1_SOLTU | M1DB25_SOLTU | M1BYR1 | M1DB25 | Thioredoxin; Belongs to the thioredoxin family. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.673 |
M1DB25_SOLTU | K7WNV9_SOLTU | M1DB25 | K7WNV9 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Thioredoxin; Belongs to the thioredoxin family. | 0.719 |
M1DB25_SOLTU | M0ZI36_SOLTU | M1DB25 | M0ZI36 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Rieske domain-containing protein. | 0.700 |
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