STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1DB25_SOLTUFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (150 aa)    
Predicted Functional Partners:
M1BK29_SOLTU
NADPH:adrenodoxin oxidoreductase, mitochondrial.
    
 0.819
M1BWE4_SOLTU
Uncharacterized protein.
   
 
 0.804
psaD
Putative photosystem I reaction centre PSI-D subunit.
   
 
 0.722
K7WNV9_SOLTU
Thioredoxin; Belongs to the thioredoxin family.
      
 0.719
M0ZI36_SOLTU
Rieske domain-containing protein.
  
 
 0.700
M0ZWN2_SOLTU
Thioredoxin; Belongs to the thioredoxin family.
      
 0.698
M1BHP2_SOLTU
Thioredoxin; Belongs to the thioredoxin family.
      
 0.687
M0ZVR1_SOLTU
Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family.
   
 
 0.674
M1BYR1_SOLTU
Thioredoxin; Belongs to the thioredoxin family.
      
 0.673
M1BUJ0_SOLTU
Uncharacterized protein.
      
 0.670
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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