M1DME7_SOLTU protein (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M1DME7_SOLTU

Uncharacterized protein; Belongs to the 'GDSL' lipolytic enzyme family. (788 aa)

Predicted Functional Partners:

M1A2V6_SOLTU

0.425

M1BDU1_SOLTU

0.425

M1BIU0_SOLTU

0.425

M1CMY9_SOLTU

0.425

M1CK06_SOLTU

0.424

M1AKT3_SOLTU

0.407

M1D7E0_SOLTU

0.403

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M1A2V6_SOLTU	M1BDU1_SOLTU	M1A2V6	M1BDU1	Uncharacterized protein.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.910
M1A2V6_SOLTU	M1BIU0_SOLTU	M1A2V6	M1BIU0	Uncharacterized protein.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.928
M1A2V6_SOLTU	M1CMY9_SOLTU	M1A2V6	M1CMY9	Uncharacterized protein.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.901
M1A2V6_SOLTU	M1DME7_SOLTU	M1A2V6	M1DME7	Uncharacterized protein.	Uncharacterized protein; Belongs to the 'GDSL' lipolytic enzyme family.	0.425
M1AKT3_SOLTU	M1DME7_SOLTU	M1AKT3	M1DME7	NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.	Uncharacterized protein; Belongs to the 'GDSL' lipolytic enzyme family.	0.407
M1BDU1_SOLTU	M1A2V6_SOLTU	M1BDU1	M1A2V6	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Uncharacterized protein.	0.910
M1BDU1_SOLTU	M1BIU0_SOLTU	M1BDU1	M1BIU0	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.910
M1BDU1_SOLTU	M1CMY9_SOLTU	M1BDU1	M1CMY9	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.909
M1BDU1_SOLTU	M1DME7_SOLTU	M1BDU1	M1DME7	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Uncharacterized protein; Belongs to the 'GDSL' lipolytic enzyme family.	0.425
M1BIU0_SOLTU	M1A2V6_SOLTU	M1BIU0	M1A2V6	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Uncharacterized protein.	0.928
M1BIU0_SOLTU	M1BDU1_SOLTU	M1BIU0	M1BDU1	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.910
M1BIU0_SOLTU	M1CMY9_SOLTU	M1BIU0	M1CMY9	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.928
M1BIU0_SOLTU	M1DME7_SOLTU	M1BIU0	M1DME7	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Uncharacterized protein; Belongs to the 'GDSL' lipolytic enzyme family.	0.425
M1CK06_SOLTU	M1DME7_SOLTU	M1CK06	M1DME7	Uncharacterized protein.	Uncharacterized protein; Belongs to the 'GDSL' lipolytic enzyme family.	0.424
M1CMY9_SOLTU	M1A2V6_SOLTU	M1CMY9	M1A2V6	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Uncharacterized protein.	0.901
M1CMY9_SOLTU	M1BDU1_SOLTU	M1CMY9	M1BDU1	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.909
M1CMY9_SOLTU	M1BIU0_SOLTU	M1CMY9	M1BIU0	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.928
M1CMY9_SOLTU	M1DME7_SOLTU	M1CMY9	M1DME7	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Uncharacterized protein; Belongs to the 'GDSL' lipolytic enzyme family.	0.425
M1D7E0_SOLTU	M1DME7_SOLTU	M1D7E0	M1DME7	Uncharacterized protein.	Uncharacterized protein; Belongs to the 'GDSL' lipolytic enzyme family.	0.403
M1DME7_SOLTU	M1A2V6_SOLTU	M1DME7	M1A2V6	Uncharacterized protein; Belongs to the 'GDSL' lipolytic enzyme family.	Uncharacterized protein.	0.425