STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1DUT0_SOLTUUncharacterized protein. (305 aa)    
Predicted Functional Partners:
M0ZS19_SOLTU
Uncharacterized protein.
    
 
 0.693
M1BS83_SOLTU
Uncharacterized protein.
  
  
 0.615
M1AZA7_SOLTU
TMP-TENI domain-containing protein.
     
 0.589
M1A2D6_SOLTU
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.553
M1AUF4_SOLTU
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
    
 
 0.543
M1AER9_SOLTU
AAA domain-containing protein.
   
 
 0.541
M1AIH5_SOLTU
AAA domain-containing protein.
   
 
 0.541
M1BQM3_SOLTU
AAA domain-containing protein.
   
 
 0.541
M1A422_SOLTU
ClpS domain-containing protein.
   
  
 0.491
M1A828_SOLTU
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
  
 0.483
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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