STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1DVZ2_SOLTUSWIRM domain-containing protein. (812 aa)    
Predicted Functional Partners:
M1BMQ1_SOLTU
ARID domain-containing protein.
    
  0.672
M1BMQ2_SOLTU
Uncharacterized protein.
    
  0.672
M1CV42_SOLTU
Uncharacterized protein.
    
  0.672
M1D3D9_SOLTU
Uncharacterized protein.
    
  0.672
M1BJP2_SOLTU
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.648
M1CKF1_SOLTU
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.648
M0ZR98_SOLTU
WD_REPEATS_REGION domain-containing protein.
    
 0.589
M1AVG4_SOLTU
Myb-like domain-containing protein.
    
 0.560
M1B6W3_SOLTU
Uncharacterized protein.
    
 0.560
M1CIN9_SOLTU
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.558
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (26%) [HD]