STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOX3.1Linoleate 13S-lipoxygenase 3-1, chloroplastic; Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Required for the regulation of wound-induced gene expression, but is not involved in the bulk production of jasmonate upon wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Linolenic acid is the preferred substrate, before linoleic and arachidonic acids. (914 aa)    
Predicted Functional Partners:
HPL
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.977
M1CXU2_SOLTU
Uncharacterized protein.
     
 0.918
M1AEK7_SOLTU
PNPLA domain-containing protein.
     
  0.900
M1CX94_SOLTU
PNPLA domain-containing protein.
     
  0.900
AOS
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.894
Aos1
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.837
M0ZIB2_SOLTU
Uncharacterized protein.
     
 0.807
M0ZIB4_SOLTU
Uncharacterized protein.
     
 0.807
M0ZIB7_SOLTU
Uncharacterized protein.
     
 0.807
M1D1P1_SOLTU
Oxidored_FMN domain-containing protein.
   
  
 0.791
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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