STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPOB_SOLTUCatechol oxidase B, chloroplastic; Catalyzes the oxidation of mono- and o-diphenols to o- diquinones; Belongs to the tyrosinase family. (588 aa)    
Predicted Functional Partners:
PPA1
Soluble inorganic pyrophosphatase PPA1; Catalyzes the irreversible hydrolysis of pyrophosphate (PPi) to phosphate; Belongs to the PPase family.
      
 0.508
M1D4D0_SOLTU
Beta-Casp domain-containing protein.
    
 0.479
M1CF28_SOLTU
Uncharacterized protein.
  
     0.476
M1C4V4_SOLTU
Uncharacterized protein.
  
 
   0.458
M1CVP6_SOLTU
Uncharacterized protein.
    
 0.458
M1CGK6_SOLTU
Uncharacterized protein.
    
 0.455
M1BF81_SOLTU
TYR_PHOSPHATASE_2 domain-containing protein.
  
 
   0.453
M1CKF4_SOLTU
Uncharacterized protein.
    
 0.453
M0ZUT6_SOLTU
Uncharacterized protein.
    
 0.451
PPA1-2
Uncharacterized protein.
      
 0.448
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.