STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cyc07-like-240S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (261 aa)    
Predicted Functional Partners:
M1BPE5_SOLTU
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.995
M1CKH6_SOLTU
Uncharacterized protein.
   
 0.995
Q38HT5_SOLTU
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 0.995
M0ZQX8_SOLTU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.991
M0ZY89_SOLTU
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.989
M1AF93_SOLTU
Uncharacterized protein.
   
 0.989
M1BZF5_SOLTU
Uncharacterized protein.
   
 0.989
M1CY42_SOLTU
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.989
Q2XPV4_SOLTU
40S ribosomal protein S10-like protein.
   
 0.989
Q2XTB2_SOLTU
40S ribosomal protein S10-like.
   
 0.989
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.