STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCM2Calmodulin-2/4; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. (124 aa)    
Predicted Functional Partners:
PPA1
Soluble inorganic pyrophosphatase PPA1; Catalyzes the irreversible hydrolysis of pyrophosphate (PPi) to phosphate; Belongs to the PPase family.
   
 
 0.684
PPA1-2
Uncharacterized protein.
   
 
 0.683
M1C1C7_SOLTU
RNA helicase.
    
 
 0.677
M0ZQX2_SOLTU
RNA helicase.
    
 
 0.672
M0ZQX3_SOLTU
RNA helicase.
    
 
 0.672
M1C0M4_SOLTU
RNA helicase.
    
 
 0.672
M1CAB9_SOLTU
RNA helicase.
    
 
 0.672
M1DLW9_SOLTU
Uncharacterized protein.
   
 0.606
M1D743_SOLTU
Peptidylprolyl isomerase.
   
 0.583
M1B9Z6_SOLTU
Uncharacterized protein.
    
 0.539
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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