STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IVDIsovaleryl-CoA dehydrogenase, mitochondrial; Involved in the catabolism of amino acids. Uses isovaleryl- CoA as substrate. Minor activity detected with 2-methylpalmitoyl-CoA or 2-methylbutanoyl-CoA, but no activity with short- and medium-straight chain acyl-CoA esters or with 2-methylhexanoyl-CoA. (412 aa)    
Predicted Functional Partners:
M1CFV3_SOLTU
Uncharacterized protein.
 
 0.990
BCE2
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.974
M1BPD9_SOLTU
Biotin carboxylation domain-containing protein.
  
 0.973
M0ZL28_SOLTU
Uncharacterized protein.
  
 0.966
M0ZKQ9_SOLTU
ETF domain-containing protein.
 
 0.962
M1BFV1_SOLTU
ETF domain-containing protein.
 
 0.957
2MBCD
2-methylacyl-CoA dehydrogenase, mitochondrial; Short/branched-chain acyl-CoA dehydrogenase (SBCAD). Uses 2- methylbutanoyl-CoA as substrate. Minor activity with the straight-chain substrates, butanoyl-CoA, valeryl-CoA, hexanoyl-CoA, and octanoyl-CoA but no activity with isovaleryl-CoA.
  
  
0.902
M1BAK9_SOLTU
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.785
M1CWA6_SOLTU
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.785
M0ZNM7_SOLTU
Uncharacterized protein.
    
 0.776
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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