STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48621.1KEGG: cpr:CPR_0750 2.5e-231 beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Psort location: Cytoplasmic, score: 8.87. (982 aa)    
Predicted Functional Partners:
EDR46537.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.947
EDR48054.1
ROK family protein; KEGG: cac:CAC2613 5.8e-88 glcK; transcriptional regulators of NagC/XylR family K00845; COG: COG1940 Transcriptional regulator/sugar kinase; Psort location: Cytoplasmic, score: 9.98.
    
 0.914
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
     
  0.900
EDR48622.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C4210 2.6e-37 yicJ; hypothetical symporter YicJ K03292; COG: COG2211 Na+/melibiose symporter and related transporters; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.872
EDR48620.1
Transcriptional regulator, AraC family; KEGG: bce:BC3740 8.0e-11 ADA regulatory protein K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.65.
 
     0.720
EDR48623.1
Transcriptional regulator, AraC family; KEGG: bha:BH0394 9.7e-08 adaA; methylphosphotriester-DNA alkyltransferase (AraC/XylS family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.98.
 
   
 0.645
EDR48214.1
YhcH/YjgK/YiaL family protein; KEGG: sbo:SBO_2936 1.3e-05 ebgC; evolved beta-D-galactosidase, beta subunit K01190; COG: COG2731 Beta-galactosidase, beta subunit; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.561
EDR46778.1
YhcH/YjgK/YiaL family protein; COG: COG2731 Beta-galactosidase, beta subunit; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.561
EDR46788.1
GHMP kinase, N-terminal domain protein; KEGG: dde:Dde_3653 3.7e-70 galactokinase K00849; COG: COG0153 Galactokinase; Psort location: Cytoplasmic, score: 8.87; Belongs to the GHMP kinase family.
 
  
 0.492
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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