Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR48577.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (207 aa)    
Predicted Functional Partners:
EDR48578.1
Hypothetical protein.
       0.773
EDR48579.1
Hypothetical protein; COG: NOG19076 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.773
rusA
Crossover junction endodeoxyribonuclease RusA; COG: COG4570 Holliday junction resolvase; Psort location: Cytoplasmic, score: 8.87.
       0.746
EDR48576.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.741
EDR48581.1
Hypothetical protein; COG: NOG33329 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.534
EDR48582.1
Hypothetical protein.
       0.523
EDR48583.1
Hypothetical protein; COG: COG0433 Predicted ATPase; Psort location: CytoplasmicMembrane, score: 7.80.
       0.501
EDR48584.1
Hypothetical protein; COG: NOG14237 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.501
EDR48585.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.501
EDR48586.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.501
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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