STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48587.1Hypothetical protein. (89 aa)    
Predicted Functional Partners:
EDR48588.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.686
EDR48589.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.658
EDR48583.1
Hypothetical protein; COG: COG0433 Predicted ATPase; Psort location: CytoplasmicMembrane, score: 7.80.
       0.608
EDR48584.1
Hypothetical protein; COG: NOG14237 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.608
EDR48585.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.608
EDR48586.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.608
EDR48582.1
Hypothetical protein.
       0.581
EDR48581.1
Hypothetical protein; COG: NOG33329 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.569
EDR48590.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.430
rusA
Crossover junction endodeoxyribonuclease RusA; COG: COG4570 Holliday junction resolvase; Psort location: Cytoplasmic, score: 8.87.
       0.418
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.