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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48602.1Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87. (486 aa)    
Predicted Functional Partners:
EDR48603.1
Hypothetical protein; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
     0.666
EDR45761.1
Hypothetical protein; KEGG: poy:PAM621 0.0045 uvrD; ATP-dependent DNA helicase K03657; COG: KOG1181 FOG: Low-complexity; Psort location: Cytoplasmic, score: 8.87.
  
     0.571
EDR48280.1
Hypothetical protein; COG: NOG13728 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.557
tnpX
TnpX site-specific recombinase; KEGG: rno:309804 0.0023 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
  
     0.555
EDR46241.1
Hypothetical protein; COG: NOG13728 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.534
dinD
DNA-damage-inducible protein D; COG: NOG06778 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.527
EDR46902.1
Recombinase; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
 
     0.520
EDR48094.1
Hypothetical protein; COG: COG5484 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
   
    0.512
EDR46458.1
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
 
     0.488
EDR47651.1
COG: COG4824 Phage-related holin (Lysis protein); Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.473
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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