STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48614.1Transcriptional regulator, TetR family; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score: 8.87. (242 aa)    
Predicted Functional Partners:
EDR48615.1
Hypothetical protein; COG: NOG19648 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.897
EDR46417.1
Hypothetical protein; COG: NOG14070 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.593
EDR47169.1
Hypothetical protein.
  
     0.587
EDR48225.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.581
EDR48612.1
Glycine/sarcosine/betaine reductase component B subunit alpha and beta; KEGG: chy:CHY_2391 5.2e-135 grdE; glycine reductase proprotein GrdE; COG: NOG06476 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.576
EDR48611.1
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; KEGG: chy:CHY_2393 5.4e-101 grdB; glycine reductase, selenoprotein B; COG: NOG06475 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.554
EDR48609.1
Hypothetical protein; KEGG: hpa:HPAG1_0925 0.00031 D-alanine glycine permease K01613; COG: COG3949 Uncharacterized membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.543
grdI
Betaine reductase complex component B subunit alpha; KEGG: tte:TTE1879 3.5e-90 GrdE proprotein; COG: NOG06476 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.536
EDR48224.1
Hypothetical protein.
  
     0.526
EDR47168.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.526
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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