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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48509.1ABC transporter, solute-binding protein; COG: COG1653 ABC-type sugar transport system, periplasmic component. (459 aa)    
Predicted Functional Partners:
EDR48510.1
Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.75.
 
     0.933
EDR45901.1
ABC transporter, ATP-binding protein; KEGG: dra:DR2153 2.4e-114 putative polar amino acid transport system ATP-binding protein K02028; COG: COG3839 ABC-type sugar transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49; Belongs to the ABC transporter superfamily.
 
 0.868
EDR46212.1
ABC transporter, ATP-binding protein; KEGG: dra:DR2153 2.7e-44 putative polar amino acid transport system ATP-binding protein K02028; COG: COG3839 ABC-type sugar transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.844
EDR46279.1
ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 0.00060 molybdenum ABC transporter ModB K06022; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.785
EDR46319.1
ABC transporter, permease protein; KEGG: lwe:lwe0999 2.5e-05 gbuB; glycine betaine/L-proline ABC transporter, permease protein; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.782
EDR46280.1
COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.778
EDR46320.1
ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 0.00010 molybdenum ABC transporter ModB K06022; COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.778
EDR45973.1
KEGG: ava:Ava_0243 7.6e-05 molybdate ABC transporter, permease protein K02018; COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.773
EDR46275.1
ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 7.2e-07 molybdenum ABC transporter ModB K06022; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.772
EDR45974.1
COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.767
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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