STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR48511.1Hypothetical protein. (53 aa)    
Predicted Functional Partners:
EDR48510.1
Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.75.
       0.773
EDR48509.1
ABC transporter, solute-binding protein; COG: COG1653 ABC-type sugar transport system, periplasmic component.
       0.701
EDR48506.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.97.
       0.499
EDR48507.1
Hypothetical protein; KEGG: afu:AF1515 7.7e-08 signal-transducing histidine kinase; COG: COG4564 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.97.
       0.499
vraR
Response regulator protein VraR; KEGG: fal:FRAAL4813 3.8e-20 putative two-component system response regulator; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
       0.499
EDR48512.1
Hypothetical protein.
       0.480
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.