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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48519.1Stage III sporulation protein AA; COG: COG3854 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. (316 aa)    
Predicted Functional Partners:
EDR48520.1
Putative stage III sporulation protein AB; COG: NOG16867 non supervised orthologous group.
 
  
 0.998
EDR48521.1
Stage III sporulation protein AC; COG: NOG17863 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.75.
 
  
 0.975
EDR48525.1
Putative stage III sporulation protein AG; COG: NOG11553 non supervised orthologous group.
 
  
 0.959
EDR48522.1
Putative stage III sporulation protein AD; COG: NOG13205 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 7.63.
 
  
 0.951
EDR48523.1
Putative stage III sporulation protein AE; COG: NOG06161 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.942
EDR48526.1
Hypothetical protein; COG: NOG17862 non supervised orthologous group.
 
  
 0.926
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.864
spoIIID
Sporulation transcriptional regulator SpoIIID; COG: NOG13855 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
   
 0.845
spoIIR
Stage II sporulation protein R; COG: NOG13215 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.839
spoVT
Stage V sporulation protein T; COG: COG2002 Regulators of stationary/sporulation gene expression; Psort location: Cytoplasmic, score: 9.98.
  
   
 0.827
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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