rpsU protein (Dorea formicigenerans) - STRING interaction network

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rpsU

COG: COG0828 Ribosomal protein S21; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial ribosomal protein bS21 family. (83 aa)

Predicted Functional Partners:

rplU

0.984

rpsT

0.982

rpmB

0.982

rpsP

0.981

rpsO

0.980

rplM

0.980

rpmA

0.977

rpmI

0.977

rplY

0.976

rpmG

0.975

Your Current Organism:

Dorea formicigenerans

NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	DORFOR_03259	DORFOR_01570	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
rplM	rplY	DORFOR_03259	DORFOR_03288	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.985
rplM	rpmA	DORFOR_03259	DORFOR_01568	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.993
rplM	rpmB	DORFOR_03259	DORFOR_01605	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0227 Ribosomal protein L28; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial ribosomal protein bL28 family.	0.989
rplM	rpmG	DORFOR_03259	DORFOR_01205	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0267 Ribosomal protein L33; Psort location: Extracellular, score: 8.82; Belongs to the bacterial ribosomal protein bL33 family.	0.987
rplM	rpmI	DORFOR_03259	DORFOR_01711	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0291 Ribosomal protein L35; Psort location: Extracellular, score: 8.82; Belongs to the bacterial ribosomal protein bL35 family.	0.989
rplM	rpsO	DORFOR_03259	DORFOR_00548	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.990
rplM	rpsP	DORFOR_03259	DORFOR_01691	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0228 Ribosomal protein S16; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial ribosomal protein bS16 family.	0.991
rplM	rpsT	DORFOR_03259	DORFOR_00565	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.989
rplM	rpsU	DORFOR_03259	DORFOR_00094	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0828 Ribosomal protein S21; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial ribosomal protein bS21 family.	0.980
rplU	rplM	DORFOR_01570	DORFOR_03259	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.990
rplU	rplY	DORFOR_01570	DORFOR_03288	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.984
rplU	rpmA	DORFOR_01570	DORFOR_01568	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplU	rpmB	DORFOR_01570	DORFOR_01605	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0227 Ribosomal protein L28; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial ribosomal protein bL28 family.	0.989
rplU	rpmG	DORFOR_01570	DORFOR_01205	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0267 Ribosomal protein L33; Psort location: Extracellular, score: 8.82; Belongs to the bacterial ribosomal protein bL33 family.	0.988
rplU	rpmI	DORFOR_01570	DORFOR_01711	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0291 Ribosomal protein L35; Psort location: Extracellular, score: 8.82; Belongs to the bacterial ribosomal protein bL35 family.	0.989
rplU	rpsO	DORFOR_01570	DORFOR_00548	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.987
rplU	rpsP	DORFOR_01570	DORFOR_01691	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0228 Ribosomal protein S16; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial ribosomal protein bS16 family.	0.987
rplU	rpsT	DORFOR_01570	DORFOR_00565	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.989
rplU	rpsU	DORFOR_01570	DORFOR_00094	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0828 Ribosomal protein S21; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial ribosomal protein bS21 family.	0.984

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