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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48559.1COG: COG1305 Transglutaminase-like enzymes, putative cysteine proteases; Psort location: Cytoplasmic, score: 8.87. (460 aa)    
Predicted Functional Partners:
EDR48558.1
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: bcz:BCZK2578 9.4e-65 ykfB; mandelate racemase/muconate lactonizing enzyme K01781; COG: COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Psort location: Cytoplasmic, score: 8.87.
 
     0.761
EDR48556.1
KEGG: cch:Cag_1883 4.8e-100 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031; COG: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.551
EDR48557.1
ABC transporter, ATP-binding protein; KEGG: reh:H16_B1124 7.5e-95 ABC-type transporter; COG: COG4608 ABC-type oligopeptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.551
EDR48554.1
KEGG: rha:RHA1_ro09047 7.8e-45 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
       0.524
EDR48555.1
ABC transporter, permease protein; KEGG: baa:BA_0884 6.0e-07 binding-protein-dependent transport systems inner membrane component K00294; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
       0.524
EDR48560.1
Hypothetical protein; COG: COG3666 Transposase and inactivated derivatives.
       0.463
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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