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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48470.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (295 aa)    
Predicted Functional Partners:
EDR47518.1
Hypothetical protein; KEGG: rno:309804 1.3e-25 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: COG1340 Uncharacterized archaeal coiled-coil protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.673
EDR45948.1
Hypothetical protein; KEGG: cac:CAC0404 2.2e-09 serine/threonine protein kinase fused to TPR repeats domain K08884; COG: COG0515 Serine/threonine protein kinase; Psort location: Cytoplasmic, score: 8.87.
  
     0.649
EDR45745.1
COG: COG4194 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.622
EDR45911.1
Hypothetical protein; COG: COG3595 Uncharacterized conserved protein.
  
     0.612
EDR47484.1
Hypothetical protein; COG: NOG21901 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.606
EDR47001.1
Tetratricopeptide repeat protein; KEGG: mth:MTH977 9.7e-10 endo-1,4-beta-glucanase related protein K01179; COG: COG3291 FOG: PKD repeat.
  
     0.573
EDR47799.1
Hypothetical protein.
  
     0.561
EDR48007.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.551
EDR48008.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.549
EDR47410.1
Hypothetical protein; KEGG: mmu:18218 0.0063 Dusp8; dual specificity phosphatase 8 K04459; COG: NOG29868 non supervised orthologous group.
  
     0.540
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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