STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48420.1Hypothetical protein; KEGG: mma:MM3205 3.8e-07 two component system histidine kinase K02484; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score: 8.87. (105 aa)    
Predicted Functional Partners:
EDR48421.1
Response regulator receiver domain protein; KEGG: vfi:VF1296 1.4e-21 luxQ; sensor protein LuxQ; COG: COG2203 FOG: GAF domain; Psort location: Cytoplasmic, score: 8.87.
 
     0.890
EDR48419.1
HD domain protein; KEGG: ava:Ava_1777 1.5e-43 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score: 8.87.
 
     0.792
EDR46491.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: ava:Ava_1777 1.6e-43 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score: 9.98.
  
     0.728
EDR48423.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: syn:slr2104 3.2e-58 hik22; two-component hybrid histidine kinase K02486; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.722
EDR48422.1
Response regulator receiver domain protein; KEGG: bba:Bd3430 2.1e-65 sensory transduction histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.70.
 
     0.714
EDR46445.1
KEGG: cvi:CV0882 6.6e-88 probable sensor/response regulator hybrid protein; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
  
     0.701
EDR46154.1
Hpt domain protein; KEGG: syn:slr2098 5.2e-06 hik21; two-component hybrid histidine kinase K07678; Psort location: Cytoplasmic, score: 8.87.
  
     0.656
EDR47416.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: pfo:Pfl_1864 3.7e-63 Hpt sensor hybrid histidine kinase K07679; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.83.
  
     0.554
EDR46822.1
Response regulator receiver domain protein; KEGG: chu:CHU_2895 4.1e-66 sensory box histidine kinase/response regulator; COG: COG2203 FOG: GAF domain; Psort location: Cytoplasmic, score: 9.36.
  
     0.523
EDR46029.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: chu:CHU_3089 1.7e-59 evgS; sensor histidine kinase/response regulator fusion protein; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.464
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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